SubtiBank SubtiBank
Version comparison:

2017-08-16 12:43:162025-05-10 04:36:32

description

ABC transporter (ATP-binding protein)

[SW|ABC transporter] (ATP-binding protein)

locus

BSU30420

BSU_30420

geneLength

693

696

product

ABC transporter (ATP-binding protein)

[SW|ABC transporter] (ATP-binding protein)

ec

outlinks

bsu

BSU30420

BSU_30420

Gene

Coordinates

3,115,279 → 3,115,974

3,115,279 3,115,974

The protein

Protein family

[SW|ABC transporter] family (according to Swiss-Prot)

[SW|ABC transporter superfamily] (according to UniProt)

Biological materials

Mutant

MGNA-B537 (ytrE::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1536 NBRP B. subtilis, Japan]

GP3191 (Δ[[gene|ytrE]]), available in [SW|Jörg Stülke]'s lab

GP2646 Δ([[gene|ytrG]]-[[gene|ytrA]]-[[gene|ytrB]]-[[gene|ytrC]]-[[gene|ytrD]]-[[gene|ytrE]]-[[gene|ytrF]])::''ermC'', available in [SW|Jörg Stülke]'s lab

MGNA-B537 (ytrE::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1536 NBRP B. subtilis, Japan]

BKE30420 ([[gene|ytrE]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE30420 BGSC] and in [SW|Jörg Stülke]'s lab, [Pubmed|28189581], upstream reverse: _UP1_ATCAATCATATGTTCTCTCT, downstream forward: _UP4_GGTGTGCTAAAAGGAGGAAT

BKK30420 ([[gene|ytrE]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK30420 BGSC], [Pubmed|28189581], upstream reverse: _UP1_ATCAATCATATGTTCTCTCT, downstream forward: _UP4_GGTGTGCTAAAAGGAGGAAT

References

10986249, 10092453, 12399512, 22926563

10986249, 10092453, 12399512, 22926563, 12150914

The protein

Paralogous protein(s)

[[this]]

The protein

[SW|Domains]

[SW|ABC transporter domain] (aa 4-231) (according to UniProt)

The protein

Structure

[PDB|1L2T] (from Methanocaldococcus jannaschii, 44% identity) [pubmed|12150914]